UW Neurological Surgery Recent PubMed Publications

Diameter, height, and volume as macroscopic predictors of photocarcinogenesis in UV-induced SKH1 papules

3 months 2 weeks ago
CONCLUSIONS: Macroscopic measurements strongly predict histology in SKH1 photocarcinogenesis. Lesions ≥6.3 mm in diameter, ≥4.1 mm in height, or ≥ 46.8 mm³ in volume can be considered cancer with 100% PPV in this dataset. These thresholds provide practical, pathology-anchored endpoints for preclinical study design.
Mehdi Boostani

Synthetic lethality of MCL-1 inhibition and CAR-T therapy in aggressive B-cell lymphoma

3 months 2 weeks ago
Aggressive B-cell lymphomas, driven by MYC overexpression, exhibit rapid progression, resistance to therapies, and poor survival. While chimeric antigen receptor (CAR)-engineered T cells have demonstrated remarkable clinical efficacy in B-cell lymphomas, nearly half of patients who initially respond to CAR-T therapy eventually develop resistance and disease progression. In this study, we report the presence of residual drug-tolerant persister (DTP) and resistant lymphoma cells remaining within a...
Jing Gao

Non-invasive ICP monitoring when invasive systems are available in the care of acute brain injured patients: a clinical approach

3 months 2 weeks ago
Invasive intracranial pressure (ICP) monitoring is considered the gold standard for the management of patients with an acute brain injury and at risk of developing intracranial hypertension (IH). However, invasive devices (e.g., intraparenchymal probe or external ventricular drain) are expensive, not available worldwide, and might be associated with some risks. Recently, a consensus for the monitoring and management of traumatic brain injury (TBI) patients when invasive ICP is not available...
Chiara Robba

Reclassification and Weighting of Multiple Causes of Death: US Death Certificates 2003-2023

3 months 2 weeks ago
Death certificates record causes of death as reported by certifiers (Entity Axis) and as standardized by mortality coding rules (Record Axis). Conventional mortality statistics then reduce these to a single underlying cause, ignoring other contributing conditions; weighting schemes can instead distribute the mortality burden across all listed causes. We evaluated the impact of re-classification and weighting across all 56,986,831 US death certificates from 2003-2023, mapping ICD-10 codes to 14...
Michael Levitt

Structure-aware Graph Learning Predicts RNA Editability Across Tissues and Species

3 months 2 weeks ago
Programmable A-to-I RNA editing using endogenous ADAR enzymes is emerging as a therapeutic strategy, but editability remains difficult to predict because ADAR recognition depends on double-stranded RNA geometry and stability rather than sequence alone. We present A dar E dit , a structure-explicit graph-attention framework that represents each dsRNA substrate as a nucleotide graph with backbone and base-pair edges and augments this representation with typed interactions and a motif-sensitive...
Zohar Rosenwasser

Quasi-continuous cotranslational compaction and folding of a multidomain protein

3 months 2 weeks ago
Most proteins start to fold cotranslationally as they come off the ribosome. So far, studies of cotranslational folding have focused mainly on small, single-domain proteins. Here, we have used Force Profile Analysis to study the cotranslational folding of Firefly luciferase, a complex 550-residue protein composed of an N-terminal domain (NTD) encompassing two split Rossmann folds (RF-1, RF-2) and a β-roll, and a flexibly attached C-terminal domain (CTD). The folding process is characterized by a...
Spyridoula Mitsikosta

Rapid Adaptive Evolution under Combination Therapy in <em>Klebsiella pneumoniae</em>

3 months 2 weeks ago
Klebsiella pneumoniae poses a substantial health concern worldwide, with high mortality often associated with its elevated resistance levels. Combination antibiotic therapies have emerged as a viable strategy for addressing infections caused by these highly resistant pathogens, yet the evolutionary routes to resistance under such regimens remain poorly understood. Here, we investigated how resistance can emerge during exposure to combination therapy by conducting an in vitro evolutionary...
Camila Maurmann de Souza

A systems approach identifies MERTK as a therapeutic vulnerability in ZFTA-RELA-driven ependymomas

3 months 2 weeks ago
Ependymomas (EPN) are rare central nervous system tumors that account for approximately 10% of intracranial tumors in children and 4% in adults. Despite their clinical and molecular heterogeneity, spanning supratentorial, posterior fossa, and spinal subtypes, treatment remains limited to surgery and radiotherapy, with chemotherapy offering minimal benefit. Here, we performed transcriptomic analysis of 370 human ependymoma samples and identified two distinct molecular subgroups: EPN-E1 and...
Marina Chan

Primary Care and Cross-Cultural Care

3 months 3 weeks ago
Cross-cultural care is health care that intentionally considers individuals and populations within their cultural contexts. Ensuring that the medical system can care for all people across all cultures is a fundamental aspect of public health. This article describes key ideas and constructs relevant to cross-cultural care and explores how primary care clinicians can contribute to improved patient and public health. Utilizing skills and concepts from medical anthropology, primary care clinicians...
Amy L Lee

ZFTA-RELA ependymomas make itaconate to epigenetically drive fusion expression

3 months 3 weeks ago
ZFTA-RELA^(+) ependymomas are malignant brain tumours defined by fusions formed between the putative chromatin remodeller ZFTA and the NF-κB mediator RELA¹. Here we show that ZFTA-RELA^(+) cells produce itaconate, a key macrophage-associated immunomodulatory metabolite². Itaconate is generated by cis-aconitate decarboxylase 1 (ACOD1; also known as IRG1). However, the production of itaconate by tumour cells and its tumour-intrinsic role are not well established. ACOD1 is upregulated in a...
Siva Kumar Natarajan

SIMPLseq: a high-sensitivity Plasmodium falciparum genotyping and PCR contamination tracking tool

3 months 3 weeks ago
CONCLUSIONS: SIMPLseq significantly extends the malaria genomic epidemiology toolkit, coupling high-sensitivity P. falciparum genotyping with PCR contamination detection in a simple laboratory protocol that uses only open-source reagents and does not require a costly pre-amplification step. Key prospective use cases for SIMPLseq include recurrent infection classification, polyclonality estimation, and genotypic infection endpoint application to intervention efficacy trials.
Philipp Schwabl

Clinical and translational results from a phase 1 trial of gemcitabine/nab-paclitaxel with nivolumab/ipilimumab or hydroxychloroquine/ipilimumab in untreated metastatic pancreatic adenocarcinoma

4 months ago
CONCLUSIONS: REVOLUTION cohorts A and B demonstrated encouraging antitumor activity in patients with mPDAC. In cohort B, hydroxychloroquine-related tolerability issues contributed to early discontinuations and reduced drug exposure. These findings highlight the potential and limitations of current chemoimmunotherapy approaches. Although neither cohort will be expanded, the results reinforce the continued promise of chemoimmunotherapy in mPDAC and the importance of refining these strategies.
Eileen M O'Reilly

Middle Meningeal Artery Embolization for Subdural Hematoma: CT/MRI End Points of the EMBOLISE Trial

4 months ago
Background Chronic subdural hematomas (cSDHs) are associated with high recurrence risks following surgical evacuation. The EMBOLISE trial demonstrated that, compared with surgery alone, adjunctive middle meningeal artery embolization (MMAE) significantly reduced reoperation rates. However, given the limitations of the clinical end points of the trial, which may be subject to interrater variability and certain biases, the quantitative imaging metrics need to be evaluated. Purpose To evaluate the...
Helge Kniep
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