UW Neurological Surgery Recent PubMed Publications

Mapping Resilient Landscapes to Climate Change in a Megadiverse Country

4 days 4 hours ago
The effects of global climate change on biodiversity and ecosystem functioning are unevenly distributed in the geographic space. Identifying sites more suitable to sustain biodiversity in a changing climate is essential to both species conservation and restoration strategies at different scales. Here, we map terrestrial climate-resilient sites for biodiversity across Brazil to identify sites with greater chances of providing suitable conditions for species to persist under regional climate...
Milena Fermina Rosenfield

One-Year Outcomes After Traumatic Brain Injury and Early Extracranial Surgery in the TRACK-TBI Study

4 days 4 hours ago
CONCLUSIONS AND RELEVANCE: In this cohort study, early EC surgery was associated with adverse function, cognition, and disability after TBI rated as moderate-severe or with radiographic abnormalities on CT scan regardless of GCS at index admission but not after orthopedic trauma or CT- TBI. Further studies may help determine whether surgical timing or other interventions can improve the observed long-term deficits.
Christopher J Roberts

Cross-modal predictive modeling of multi-omic data in 3D airway organ tissue equivalents during viral infection

4 days 4 hours ago
INTRODUCTION: Developing robust predictive models from multi-omics data is challenging because sample sizes are typically small (often fewer than 100) while the feature space is vast (over 20,000 molecular features such as genes, transcripts, and proteins), which increases the risk of overfitting and limits generalizability. To address this challenge, this study introduces the Magnitude-Altitude Score Analysis for Tracking Infection and Time-Dependent Genes (MASIT), a novel method adept at...
Mostafa Rezapour

The cell-type-specific genetic architecture of chronic pain in brain and dorsal root ganglia

1 week ago
Chronic pain is a complex clinical problem comprising multiple conditions that may share a common genetic profile. Genome-wide association studies (GWAS) have identified many risk loci whose cell-type context remains unclear. Here, we integrated GWAS data on chronic pain (N = 1,235,695) with single-cell RNA sequencing (scRNA-seq) data from human brain and dorsal root ganglia (hDRG), and single-cell chromatin accessibility data from human brain and mouse dorsal horn. Pain-associated variants were...
Sylvanus Toikumo

Farnesol emulsion for elimination of <em>Pseudomonas aeruginosa</em> biofilm in a 3D airway model of cystic fibrosis

1 week 1 day ago
Cystic fibrosis (CF), a life-shortening genetic disease, is hallmarked by mucus obstruction, respiratory deficiency, and chronic bacterial infections. Pseudomonas aeruginosa is the most common virulent respiratory pathogen that is detrimental to the overall survival of CF patients. Here we evaluate the efficacy of farnesol emulsion, a broad-spectrum agent recently used to combat P. aeruginosa biofilm infections, for reducing P. aeruginosa infections in CF using a three-dimensional (3D) airway...
Li Tan

Acute Surgery vs Conservative Treatment for Traumatic Acute Subdural Hematoma

1 week 4 days ago
CONCLUSIONS AND RELEVANCE: In this comparative effectiveness study, similar patients with traumatic ASDH were treated differently due to center-specific treatment preferences. Outcomes were similar in centers preferring surgical evacuation and those preferring initial conservative treatment. This study suggests that, for a patient with ASDH for whom a neurosurgeon experiences clinical equipoise between acute surgery vs (initial) conservative treatment, conservative treatment may be considered.
Thomas A Van Essen

An inspiration-off attractor supports the robust and flexible control of breathing

1 week 4 days ago
Breathing is a fundamental motor rhythm necessary to sustain life. The rhythm and pattern of breathing arises from the coordination of a bilaterally symmetric, rostro-caudally extended column of heterogeneous neural populations in the medulla called the Ventral Respiratory Column (VRC). By recording from the extent of the VRC using Neuropixels during optogenetic and physiological manipulations, and projecting the population activity into a dynamical latent space, we find that GABAergic...
Nicholas E Bush

Patient Perceptions on Operative Reports Written by Surgeons Versus Versions Simplified by Artificial Intelligence

1 week 5 days ago
CONCLUSIONS: This study suggests that operative reports simplified by AI can facilitate patient understanding. However, preferences varied according to patient demographics, indicating the need for individualized approaches to simplification. Further research is necessary to optimize the use of AI for personalized patient education and to evaluate the long-term impact on healthcare outcomes.
James Pan

Transcriptome of the human C2 dorsal root ganglia in C1-2 arthrodesis surgery: insight for neck pain

1 week 6 days ago
Neurons in the dorsal root ganglion (DRG) receive and transmit sensory information from the tissues they innervate and from the external environment. Upper cervical (C1-C2) DRGs are functionally unique as they receive input from the neck, head, and occipital cranial dura, the latter two of which are also innervated by the trigeminal ganglion (TG). The C2 DRG also plays an important role in neck pain, a common and disabling disorder that is poorly understood. Advanced transcriptomic approaches...
Asta Arendt-Tranholm

Single-session versus staged approaches for chronic subdural hematoma treatment with middle meningeal artery embolization and evacuation surgery: a propensity score-matched analysis

1 week 6 days ago
CONCLUSIONS: Single-session MMAE plus surgical evacuation appears to be safe and shortens LOS compared with a staged approach. The rates of functional outcomes, re-evacuation, and mortality did not differ significantly from those observed in patients who underwent staged procedures.
Santiago Gomez-Paz

Low-Intensity ultrasound for controlled excitation and suppression in rat sciatic nerve

1 week 6 days ago
Low-intensity, low-frequency ultrasound has shown promise for neuromodulation, particularly for influencing peripheral neural activity. However, the precise parameters required to modulate neuronal activity remain poorly understood, limiting its broader application. Here, we investigated the effects of varying the sonication duration (SD) and duty cycle (DC) on motor neuronal responses in the rat sciatic nerve, with a focus on understanding how cumulative energy exposure influences the...
Heba M Badawe

Predicting Vasospasm and Delayed Cerebral Ischemia in Aneurysmal Subarachnoid Hemorrhage: The Role of Vessel Wall MRI

2 weeks 1 day ago
CONCLUSIONS: Qualitative adjusted vessel wall enhancement is associated with SAH and is a reliable, independent predictor of angiographic vasospasm, but is not predictive of delayed cerebral ischemia. Given the multifactorial nature of SAH-related complications, integrating vessel wall enhancement with conventional imaging and clinical factors may improve risk stratification and predictive assessment.
Mehmet Aksakal

Gain-of-function mutant p53 regulates long-noncoding RNA LINC00643 to modulate HIF1α in glioblastoma

2 weeks 4 days ago
Gain-of-function mutations of p53 (GOF-MUT-p53) act as oncogenes by regulating gene transcription. We screened for the genome-wide transcriptional targets of GOF-MUT-p53 in glioblastoma (GBM) and found that a significant subset of them were long non-coding RNAs (lncRNA). Among these, LINC00643 was strongly repressed by GOF-MUT-p53 but not wild-type p53. LINC00643 was downregulated in GBM and low-grade glioma and correlated with patient survival. LINC00643 and its conserved third exon (Exon3)...
Ying Zhang

Gliomas phenocopy an inborn error of metabolism to drive neuronal activity and tumor growth

2 weeks 4 days ago
The metabolic hallmarks of high-grade glioma (HGG) are not fully understood. Human brain tissue metabolomics revealed that the creatine synthesis pathway intermediate guanidinoacetate (GAA) accumulated ∼100-fold in HGGs relative to controls, which was caused by imbalanced activities of enzymes in this pathway. Glioma cells secreted GAA rather than using it to produce creatine, implicating an unexpected function. GAA accumulates in GAMT deficiency, an inborn error of metabolism, and elevates...
Kalil G Abdullah
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